Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847341.1_cds_XP_016510021.1_22905
CDS Infomation

[gene=LOC107827397] [db_xref=GeneID:107827397] [protein=ankyrin repeat protein SKIP35-like] [protein_id=XP_016510021.1] [location=complement(join(33715..34521,38836..39268,39944..40569))] [gbkey=CDS]
Sequence

ATGGAAGAAGACAGAATAGAAAGTGGGATCAAGATTAGTACAGATGAGTCTCAGTGTTTT
GAGATGGAAGTGGAATCTTGTGAGACTGGAATACCTGGTTTGAACAATGAGAATGGTGAA
GGAAGCAATGGTAATGTGGTATTTTCGAGAGAATCTCCGCTTGTAAGTAAAGACTTTAGA
TCATCTGCTATAGTTGGAGGAGGAGGAGGGTGTAATTGTGGAGTTAATAAACTTAAAGCC
AGATTGTCTAGTTCAGACTGTGAGGTTGGGAAAAATGAGAAATCGGGGCATGAGAAGAAG
CTTAATAGACAAGAGAGGATCGAGTTAGGGCGATTGTTTCAGGGTGCTGTGAGTTGCCAT
GACTGGGAGCTCGCTGAGAGTTTGATTCTACTGGCGGATCCCCTGACTCTGAATGATGCA
TTATGCATCGCGTTAGATTCGATATGGTTTTTAAGTACACAAGAAGAGTTATATGGGATA
ACAGGGTTGATTAAGAAGATCATTTCTAATGGTGCCTTTGATTTCACTCGGGCAGCCCTA
AGGACTTCATTTCTTGCTTCTTGTGTTTCTGCTTGCCAGAGTAGGACTATGAGCCTCGCG
GATACCGTGACTGTAATGGCACAAAGGTTGCGTGAACGACTTCAAGAGTGCAATGGGGAT
GAAGTTTTGAAGGCAGAAGCTGGTGCTAAGGTTCAGAAGTTCACTGAATGGGCTCTTAAA
TGTATTGGTTTCCATTCCCGCTGCCAAGGGAACAGGGATAAGGTTGGGCATAATGCTGCT
GTTGAAATACAACTACAGTTGTCGGCTTTCAAGACTTTCCTTGATCTTGCTGGGAACCAC
CTTACAGGAAAGGATTTCACGGAAGCATTTGACGCAGCTTGCTTCCCACTTACACTCTTC
TCTAGTTCGTTTGATCCGGGCTGGGCATCGGGTATTTCAGCTACGGCAATCCAAGGACTG
CTTGGCATGTTGGTGGAGGGCGGTGCGGACAATGTCAACCAATGCTTTCTTGAAGCATCT
CGTTTTGGGAGCACTGAGCTTGTCCGCATTCTTCTCCAGATTGCTCAAAGGAATAGCTTG
GATGTTGATGTCGACTTGGCTCTGGGATTTGCCTCCCATTATGGTAAAATTGGAACTATG
GAATGTCTAGTGGAAGAAGGGAATGCGATGGCTTTCTTGGGACCTTTGATGAGAGCTGCT
GAAAGGGGCTGCATTCAGGTAGTTGACTGGTTTGTTAAAAGAGGTTGCAGAGACATGGAA
CTATGTCTCGCCCTCACAGCTGCTACCTCCAGTAGTCAGGTTGAAGTTGCCGAATATCTC
CTTCCTCACGTTCCTCAGCATGTTCTTGCTGCCCTAAGTATCGAGATTCTTAAGGCTGCT
GGTGAAAGAAGTGGCGGATCTCTCGATGGTGTAGCATTTCTACTAAGTTCAGACTTCCTC
GGTGATCCAGCTGCCACTTATGCGGTTGCGGACAGCATCGCTAAGTTGGACGACGAGGCT
GTCGCTCCTGAGCTCAGGTCTTTCCTTCGGGAGCATTGGTCGGAAGCTGCTTTCTCAGAC
GGGCTTAGGCAAGGACAAGAACACTACTTGAATATCGTGCGTATTTTGAAATGGGGGGAA
TCTCCCGTGTGTTTGGGGGATCTTCCCGGGCCCTTGAGAGTAGCAATAGCATACCTGCCG
CTGTATAGGGAATGTGTCAAGGCAGGGGGTTGCTTGTTATCACAAAGGCTTAGGGGGCAG
CTCGTGGAAGCAGCGAAAAGGCTTGACGGCGTCGTGTTGGAAGAGGTAAACCAGGGAAGA
GAATTATTGGCTGTTTTGGAGCATCATATTCCCCCATTTTTGGTTAATGCATCCAGTGCT
GCTTAG

Peptide Sequence

PEP ID

XP_016510021.1
PEP Infomation

PREDICTED: ankyrin repeat protein SKIP35-like [Nicotiana tabacum]
Sequence

MEEDRIESGIKISTDESQCFEMEVESCETGIPGLNNENGEGSNGNVVFSRESPLVSKDFR
SSAIVGGGGGCNCGVNKLKARLSSSDCEVGKNEKSGHEKKLNRQERIELGRLFQGAVSCH
DWELAESLILLADPLTLNDALCIALDSIWFLSTQEELYGITGLIKKIISNGAFDFTRAAL
RTSFLASCVSACQSRTMSLADTVTVMAQRLRERLQECNGDEVLKAEAGAKVQKFTEWALK
CIGFHSRCQGNRDKVGHNAAVEIQLQLSAFKTFLDLAGNHLTGKDFTEAFDAACFPLTLF
SSSFDPGWASGISATAIQGLLGMLVEGGADNVNQCFLEASRFGSTELVRILLQIAQRNSL
DVDVDLALGFASHYGKIGTMECLVEEGNAMAFLGPLMRAAERGCIQVVDWFVKRGCRDME
LCLALTAATSSSQVEVAEYLLPHVPQHVLAALSIEILKAAGERSGGSLDGVAFLLSSDFL
GDPAATYAVADSIAKLDDEAVAPELRSFLREHWSEAAFSDGLRQGQEHYLNIVRILKWGE
SPVCLGDLPGPLRVAIAYLPLYRECVKAGGCLLSQRLRGQLVEAAKRLDGVVLEEVNQGR
ELLAVLEHHIPPFLVNASSAA

Transcript Sequence

Gene sequence data has not been registered.